Genome/Multi-omics Database

Background


Genome database case

Genome database case

 

Genome database is a portal of species. Scientists concerned with this species can search genetic variation information through the website, carry out sequence analysis and comparison, and provide reference information for genetic breeding, gene mapping and other applications.

The core module of the genome database is the genome browser, which can visually display the information of gene structure, mutation sites, gene expression, etc.

Brief Introduction


  • Genome Database Tools
  • Genome sequence extraction
  • Annotated gene information, including gene structure, coding starting position, functional annotation, sequence, etc
  • Repeated region marking
  • MRNA/cDNA sequence and transcriptome sequencing data
  • Alternative splicing event
  • Other data aligned to the genome, such as molecular markers, QTLs, SNPs, etc
  • Configuration tools: BLAST sequence alignment, primer design, etc

Characteristic


Multi-omics database:  In recent years, with the development of high-throughput detection technology and the public use of omics database, a large number of genome, transcriptome, proteome and other omics data have been generated, which contains a lot of information. The traditional analysis strategy based on single omics data is so limited that it fails to explain the complete biological process well. However, the integrated analysis of multi omics data facilitate the full use of various information of samples, producing more accurate and reliable research results. Combine the association analysis between genome, transcriptome, epigenome, proteome, metabolome, phenome, enviromental-omics to fully explore the biological significance behind the materials.

Function


Multi group database function

 

  • Wide applicability: applicable to various kinds of crops
  • Reference genome
  • Variation maps
  • Proteome
  • Phenome
  • Pan genome
  • Transcriptome ( Metabolome data and Phenome data can be added according to user needs)

 

Case